Hi Pavel, thanks for responding!
Warm-up runs were also mentioned by Steve Sarsfield from Cambridge Semantics so I plan to re-evaluate with this in mind!
The new UI looks great, I look forward to trying it and will also note this for next evaluation.
Sorry about the security error, I will update the post to fix that!
In addition to default setting comparisons, I might try to optimise each triplestore to compare this also.
I will let you know when I complete and release my more comprehensive evaluation!